[INFO] cloning repository https://github.com/PlasmaPower/kmer-counter
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/PlasmaPower/kmer-counter" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FPlasmaPower%2Fkmer-counter", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FPlasmaPower%2Fkmer-counter'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 2c45214e26574202f848066e0a991ef5274443d0
[INFO] checking PlasmaPower/kmer-counter against master#cfbc6d4cf1acbac5c025acf8ed68929caa551df3 for pr-75494-beta
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FPlasmaPower%2Fkmer-counter" "/workspace/builds/worker-2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-2/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/PlasmaPower/kmer-counter on toolchain cfbc6d4cf1acbac5c025acf8ed68929caa551df3
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+cfbc6d4cf1acbac5c025acf8ed68929caa551df3" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/PlasmaPower/kmer-counter
[INFO] finished tweaking git repo https://github.com/PlasmaPower/kmer-counter
[INFO] tweaked toml for git repo https://github.com/PlasmaPower/kmer-counter written to /workspace/builds/worker-2/source/Cargo.toml
[INFO] crate git repo https://github.com/PlasmaPower/kmer-counter already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+cfbc6d4cf1acbac5c025acf8ed68929caa551df3" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded error-chain v0.7.1
[INFO] [stderr]   Downloaded backtrace v0.3.0
[INFO] [stderr]   Downloaded backtrace-sys v0.1.5
[INFO] [stderr]   Downloaded rustc-demangle v0.1.3
[INFO] [stderr]   Downloaded jobsteal v0.5.1
[INFO] [stderr]   Downloaded memmap v0.5.0
[INFO] [stderr]   Downloaded fs2 v0.3.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+cfbc6d4cf1acbac5c025acf8ed68929caa551df3" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 1bfea7dca8bcdb69f99474180c274c1afbb2d1074828bd005e54a78e06167f51
[INFO] running `Command { std: "docker" "start" "-a" "1bfea7dca8bcdb69f99474180c274c1afbb2d1074828bd005e54a78e06167f51", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "1bfea7dca8bcdb69f99474180c274c1afbb2d1074828bd005e54a78e06167f51", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "1bfea7dca8bcdb69f99474180c274c1afbb2d1074828bd005e54a78e06167f51", kill_on_drop: false }`
[INFO] [stdout] 1bfea7dca8bcdb69f99474180c274c1afbb2d1074828bd005e54a78e06167f51
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+cfbc6d4cf1acbac5c025acf8ed68929caa551df3" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 5ba774c58df05388ba0613f472420630e3b2df238bb767954b6d61353d976808
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "5ba774c58df05388ba0613f472420630e3b2df238bb767954b6d61353d976808", kill_on_drop: false }`
[INFO] [stderr]    Compiling backtrace v0.3.0
[INFO] [stderr]     Checking cfg-if v0.1.0
[INFO] [stderr]     Checking rustc-demangle v0.1.3
[INFO] [stderr]     Checking utf8-ranges v0.1.3
[INFO] [stderr]     Checking regex-syntax v0.3.9
[INFO] [stderr]     Checking strsim v0.5.2
[INFO] [stderr]     Checking unicode-width v0.1.3
[INFO] [stderr]     Checking log v0.3.6
[INFO] [stderr]     Checking ansi_term v0.9.0
[INFO] [stderr]     Checking vec_map v0.6.0
[INFO] [stderr]     Checking unicode-segmentation v0.1.2
[INFO] [stderr]     Checking crossbeam v0.2.10
[INFO] [stderr]    Compiling dbghelp-sys v0.2.0
[INFO] [stderr]    Compiling backtrace-sys v0.1.5
[INFO] [stderr]     Checking rand v0.3.15
[INFO] [stderr]     Checking term_size v0.2.1
[INFO] [stderr]     Checking memmap v0.5.0
[INFO] [stderr]     Checking thread-id v2.0.0
[INFO] [stderr]     Checking thread_local v0.2.7
[INFO] [stderr]     Checking clap v2.19.0
[INFO] [stderr]     Checking error-chain v0.7.1
[INFO] [stderr]     Checking jobsteal v0.5.1
[INFO] [stderr]     Checking regex v0.1.80
[INFO] [stderr]     Checking env_logger v0.3.5
[INFO] [stderr]     Checking kmer-counter v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: use of deprecated item 'try': use the `?` operator instead
[INFO] [stdout]   --> src/get_kmers.rs:38:25
[INFO] [stdout]    |
[INFO] [stdout] 38 |             let n: u8 = try!(n).into();
[INFO] [stdout]    |                         ^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(deprecated)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated item 'try': use the `?` operator instead
[INFO] [stdout]   --> src/runner.rs:45:22
[INFO] [stdout]    |
[INFO] [stdout] 45 |     let mut inputs = try!(inputs.into_iter()
[INFO] [stdout]    |                      ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated item 'try': use the `?` operator instead
[INFO] [stdout]    --> src/runner.rs:107:18
[INFO] [stdout]     |
[INFO] [stdout] 107 |     let counts = try!(input_counts.into_inner()
[INFO] [stdout]     |                  ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated item 'try': use the `?` operator instead
[INFO] [stdout]    --> src/runner.rs:112:18
[INFO] [stdout]     |
[INFO] [stdout] 112 |     let counts = try!(counts.chain_err(|| "Encountered an error during k-mer counting"));
[INFO] [stdout]     |                  ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated item 'try': use the `?` operator instead
[INFO] [stdout]   --> src/readers/mmap.rs:51:16
[INFO] [stdout]    |
[INFO] [stdout] 51 |     let mmap = try!(Mmap::open_path(path, memmap::Protection::Read)
[INFO] [stdout]    |                ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated item 'try': use the `?` operator instead
[INFO] [stdout]   --> src/readers/file.rs:21:16
[INFO] [stdout]    |
[INFO] [stdout] 21 |     let file = try!(File::open(path).chain_err(|| "Failed to open input file"));
[INFO] [stdout]    |                ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/error_string.rs:26:32
[INFO] [stdout]    |
[INFO] [stdout] 26 |     fn cause(&self) -> Option<&Error> {
[INFO] [stdout]    |                                ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(bare_trait_objects)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/runner.rs:49:53
[INFO] [stdout]    |
[INFO] [stdout] 49 |                         Box::new(it.map(Ok)) as Box<Iterator<Item = Result<u8>> + Send + Sync>
[INFO] [stdout]    |                                                     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `dyn Iterator<Item = Result<u8>> + Send + Sync`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/runner.rs:53:51
[INFO] [stdout]    |
[INFO] [stdout] 53 |                     .map(|it| Box::new(it) as Box<Iterator<Item = Result<u8>> + Send + Sync>)
[INFO] [stdout]    |                                                   ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `dyn Iterator<Item = Result<u8>> + Send + Sync`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/runner.rs:61:28
[INFO] [stdout]    |
[INFO] [stdout] 61 |                     as Box<Iterator<Item = Result<u8>> + Send + Sync>);
[INFO] [stdout]    |                            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `dyn Iterator<Item = Result<u8>> + Send + Sync`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated item 'try': use the `?` operator instead
[INFO] [stdout]   --> src/get_kmers.rs:38:25
[INFO] [stdout]    |
[INFO] [stdout] 38 |             let n: u8 = try!(n).into();
[INFO] [stdout]    |                         ^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(deprecated)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated item 'try': use the `?` operator instead
[INFO] [stdout]   --> src/runner.rs:45:22
[INFO] [stdout]    |
[INFO] [stdout] 45 |     let mut inputs = try!(inputs.into_iter()
[INFO] [stdout]    |                      ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated item 'try': use the `?` operator instead
[INFO] [stdout]    --> src/runner.rs:107:18
[INFO] [stdout]     |
[INFO] [stdout] 107 |     let counts = try!(input_counts.into_inner()
[INFO] [stdout]     |                  ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated item 'try': use the `?` operator instead
[INFO] [stdout]    --> src/runner.rs:112:18
[INFO] [stdout]     |
[INFO] [stdout] 112 |     let counts = try!(counts.chain_err(|| "Encountered an error during k-mer counting"));
[INFO] [stdout]     |                  ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated item 'try': use the `?` operator instead
[INFO] [stdout]   --> src/readers/mmap.rs:51:16
[INFO] [stdout]    |
[INFO] [stdout] 51 |     let mmap = try!(Mmap::open_path(path, memmap::Protection::Read)
[INFO] [stdout]    |                ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated item 'try': use the `?` operator instead
[INFO] [stdout]   --> src/readers/file.rs:21:16
[INFO] [stdout]    |
[INFO] [stdout] 21 |     let file = try!(File::open(path).chain_err(|| "Failed to open input file"));
[INFO] [stdout]    |                ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/error_string.rs:26:32
[INFO] [stdout]    |
[INFO] [stdout] 26 |     fn cause(&self) -> Option<&Error> {
[INFO] [stdout]    |                                ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(bare_trait_objects)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/runner.rs:49:53
[INFO] [stdout]    |
[INFO] [stdout] 49 |                         Box::new(it.map(Ok)) as Box<Iterator<Item = Result<u8>> + Send + Sync>
[INFO] [stdout]    |                                                     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `dyn Iterator<Item = Result<u8>> + Send + Sync`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/runner.rs:53:51
[INFO] [stdout]    |
[INFO] [stdout] 53 |                     .map(|it| Box::new(it) as Box<Iterator<Item = Result<u8>> + Send + Sync>)
[INFO] [stdout]    |                                                   ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `dyn Iterator<Item = Result<u8>> + Send + Sync`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stdout]   --> src/runner.rs:61:28
[INFO] [stdout]    |
[INFO] [stdout] 61 |                     as Box<Iterator<Item = Result<u8>> + Send + Sync>);
[INFO] [stdout]    |                            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `dyn Iterator<Item = Result<u8>> + Send + Sync`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated item 'std::error::Error::description': use the Display impl or to_string()
[INFO] [stdout]    --> src/runner.rs:108:55
[INFO] [stdout]     |
[INFO] [stdout] 108 |                       .map_err(|e| ErrorString::new(e.description().to_string())) // e is not Sync
[INFO] [stdout]     |                                                       ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated item 'std::error::Error::description': use the Display impl or to_string()
[INFO] [stdout]    --> src/runner.rs:108:55
[INFO] [stdout]     |
[INFO] [stdout] 108 |                       .map_err(|e| ErrorString::new(e.description().to_string())) // e is not Sync
[INFO] [stdout]     |                                                       ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]   --> src/kmer_tree.rs:42:24
[INFO] [stdout]    |
[INFO] [stdout] 42 |         while let Some(mut count) = self.counts.get_mut(self.index) {
[INFO] [stdout]    |                        ----^^^^^
[INFO] [stdout]    |                        |
[INFO] [stdout]    |                        help: remove this `mut`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_mut)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]   --> src/kmer_tree.rs:42:24
[INFO] [stdout]    |
[INFO] [stdout] 42 |         while let Some(mut count) = self.counts.get_mut(self.index) {
[INFO] [stdout]    |                        ----^^^^^
[INFO] [stdout]    |                        |
[INFO] [stdout]    |                        help: remove this `mut`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_mut)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 12 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 12 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 9.43s
[INFO] running `Command { std: "docker" "inspect" "5ba774c58df05388ba0613f472420630e3b2df238bb767954b6d61353d976808", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5ba774c58df05388ba0613f472420630e3b2df238bb767954b6d61353d976808", kill_on_drop: false }`
[INFO] [stdout] 5ba774c58df05388ba0613f472420630e3b2df238bb767954b6d61353d976808
